Transcript: lnc-MAP3K14-3:5

Basic information

LNCipedia transcript ID: lnc-MAP3K14-3:5 
LNCipedia gene ID: lnc-MAP3K14-3
Location (hg38): chr17:45270752-45273602
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 570 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000586644.1
Alternative gene names: ENSG00000006062.9; MAP3K14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 78.9955 coding 
CPAT coding probability 26.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAP3K14-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf46-3:5
4.0 lnc-MAP3K14-3:5
4.1 lnc-MAP3K14-3:5
5.0 lnc-MAP3K14-3:5
5.1 lnc-GFAP-22:10
5.2 lnc-MAP3K14-3:5