Transcript: lnc-MAP1B-2:2

Basic information

LNCipedia transcript ID: lnc-MAP1B-2:2 
LNCipedia gene ID: lnc-MAP1B-2
Location (hg38): chr5:72360690-72362978
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2289 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000606310.1
Alternative gene names: ENSG00000272093.1; CTC-365E16.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.1663 non-coding 
CPAT coding probability 5.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP1B-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTCD2-2:1
4.0 lnc-PTCD2-2:1
4.1 lnc-PTCD2-2:1
5.0 lnc-PTCD2-2:1
5.1 lnc-MAP1B-2:1
5.2 lnc-MAP1B-2:2