Transcript: lnc-MAP10-6:2

Basic information

LNCipedia transcript ID: lnc-MAP10-6:2 
LNCipedia gene ID: lnc-MAP10-6
Location (hg38): chr1:232695934-232701401
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2268 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_4259_NR_033927
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.0334 non-coding 
CPAT coding probability 4.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP10-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1383-6:2
4.0 lnc-KIAA1383-6:2
4.1 lnc-KIAA1383-6:2
5.0 lnc-KIAA1383-6:2
5.1 lnc-KCNK1-19:2
5.2 lnc-MAP10-6:2