Transcript: lnc-MAP10-4:2

Basic information

LNCipedia transcript ID: lnc-MAP10-4:2 
LNCipedia gene ID: lnc-MAP10-4
Location (hg38): chr1:232776007-232786844
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1257 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001hwi_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.4755 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP10-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1383-4:2
4.0 lnc-KIAA1383-4:2
4.1 lnc-KIAA1383-4:2
5.0 lnc-KIAA1383-4:2
5.1 lnc-KCNK1-14:2
5.2 lnc-MAP10-4:2