Transcript: lnc-MALRD1-11:1

Basic information

LNCipedia transcript ID: lnc-MALRD1-11:1 
LNCipedia gene ID: lnc-MALRD1-11
Location (hg38): chr10:20284364-20289720
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5357 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA159:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.7011 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MALRD1-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PLXDC2-11:1
4.1 lnc-PLXDC2-11:1
5.0 lnc-PLXDC2-11:1
5.1 lnc-NPY4R2-309:1
5.2 lnc-MALRD1-11:1