Transcript: lnc-MAFF-6:1

Basic information

LNCipedia transcript ID: lnc-MAFF-6:1 
LNCipedia gene ID: lnc-MAFF-6
Location (hg38): chr22:38291338-38291692
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 355 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr22_3098_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -742.2233 non-coding 
CPAT coding probability 13.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAFF-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAFF-6:1
4.0 lnc-MAFF-6:1
4.1 lnc-MAFF-6:1
5.0 lnc-MAFF-6:1
5.1 lnc-APOBEC3H-41:1
5.2 lnc-MAFF-6:1