Transcript: lnc-MAFB-2:2

Basic information

LNCipedia transcript ID: lnc-MAFB-2:2 
LNCipedia gene ID: lnc-MAFB-2
Location (hg38): chr20:39655339-39660988
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1084 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028386; NONHSAT079724
Alternative gene names: XLOC_013742; linc-KIAA1755-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.23 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAFB-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAFB-2:2
3.1 lnc-MAFB-2:2
4.0 lnc-MAFB-2:2
4.1 lnc-MAFB-2:2
5.0 lnc-MAFB-2:2
5.1 lnc-EIF6-61:3
5.2 lnc-MAFB-2:2