Transcript: lnc-MACROD1-1:7

Basic information

LNCipedia transcript ID: lnc-MACROD1-1:7 
LNCipedia gene ID: lnc-MACROD1-1
Location (hg38): chr11:64182485-64185677
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3193 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005769.1|FTMT24200003381.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.7989 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MACROD1-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MACROD1-1:7
5.0 lnc-MACROD1-1:7
5.1 lnc-LTBP3-85:6
5.2 lnc-MACROD1-1:7