Transcript: lnc-MACROD1-1:4

Basic information

LNCipedia transcript ID: lnc-MACROD1-1:4 
LNCipedia gene ID: lnc-MACROD1-1
Location (hg38): chr11:64173211-64185677
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6570 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005769.1|MICT00000060555.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.8035 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MACROD1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MACROD1-1:4
5.0 lnc-MACROD1-1:4
5.1 lnc-LTBP3-85:3
5.2 lnc-MACROD1-1:4