Transcript: lnc-LZTS1-2:2

Basic information

LNCipedia transcript ID: lnc-LZTS1-2:2 
LNCipedia gene ID: lnc-LZTS1-2
Location (hg38): chr8:20951569-20973834
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1450 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014944; NONHSAT125406
Alternative gene names: XLOC_007018; linc-LZTS1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VLDDLGCGK 92.8571428571429% antisense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.052 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LZTS1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LZTS1-2:2
3.1 lnc-LZTS1-2:2
4.0 lnc-LZTS1-2:2
4.1 lnc-LZTS1-2:2
5.0 lnc-LZTS1-2:2
5.1 lnc-EGR3-27:2
5.2 lnc-LZTS1-2:2