Transcript: lnc-LYZL1-15:27

Basic information

LNCipedia transcript ID: lnc-LYZL1-15:27 
LNCipedia gene ID: lnc-LYZL1-15
RefSeq ID: NR_110928
Location (hg38): chr10:29410243-29469130
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 486 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110928; NR_110928.1
Alternative gene names: ; RP11-534G20.3; SVIL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.129 non-coding 
CPAT coding probability 7.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYZL1-15:27 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYZL1-3:29
4.0 SVIL-AS1:29
4.1 SVIL-AS1:29
5.0 SVIL-AS1:29
5.1 lnc-NPY4R2-566:27
5.2 lnc-LYZL1-15:27