Transcript: lnc-LY6E-7:7

Basic information

LNCipedia transcript ID: lnc-LY6E-7:7 
LNCipedia gene ID: lnc-LY6E-7
Ensembl Gene ID: ENSG00000177335
Ensembl Transcript ID: ENST00000622366
Location (hg38): chr8:143043002-143049252
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 399 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622366.3
Alternative gene names: ENSG00000177335.10; C8orf31


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -551.5147 non-coding 
CPAT coding probability 65.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LY6E-7:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C8orf31-1:8
4.1 lnc-C8orf31-1:8
5.0 lnc-C8orf31-1:8
5.1 lnc-GPT-54:7
5.2 lnc-LY6E-7:7