Transcript: lnc-LTC4S-2:3

Basic information

LNCipedia transcript ID: lnc-LTC4S-2:3 
LNCipedia gene ID: lnc-LTC4S-2
Location (hg38): chr5:179811615-179813641
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1722 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105631
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.4996 non-coding 
CPAT coding probability 49.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LTC4S-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LTC4S-2:3
4.0 lnc-LTC4S-2:3
4.1 lnc-LTC4S-2:3
5.0 lnc-LTC4S-2:3
5.1 lnc-LTC4S-2:6
5.2 lnc-LTC4S-2:3