Transcript: lnc-LTC4S-2:2

Basic information

LNCipedia transcript ID: lnc-LTC4S-2:2 
LNCipedia gene ID: lnc-LTC4S-2
Location (hg38): chr5:179807324-179813598
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2405 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT105630
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4511 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LTC4S-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LTC4S-2:2
4.0 lnc-LTC4S-2:2
4.1 lnc-LTC4S-2:2
5.0 lnc-LTC4S-2:2
5.1 lnc-LTC4S-2:5
5.2 lnc-LTC4S-2:2