Transcript: lnc-LRRC8C-2:3

Basic information

LNCipedia transcript ID: lnc-LRRC8C-2:3 
LNCipedia gene ID: lnc-LRRC8C-2
Location (hg38): chr1:89786068-89787589
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 793 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001024; NONHSAT004383
Alternative gene names: XLOC_000291; linc-LRRC8D-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3939 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC8C-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRC8D-2:1
3.1 lnc-LRRC8D-2:1
4.0 lnc-LRRC8D-2:1
4.1 lnc-LRRC8D-2:1
5.0 lnc-LRRC8D-2:1
5.1 lnc-LRRC8C-2:2
5.2 lnc-LRRC8C-2:3