Transcript: lnc-LRRC7-20:2

Basic information

LNCipedia transcript ID: lnc-LRRC7-20:2 
LNCipedia gene ID: lnc-LRRC7-20
Ensembl Gene ID: ENSG00000285407
Ensembl Transcript ID: ENST00000646995
Location (hg38): chr1:68881577-68943452
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1299 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646995.1
Alternative gene names: ENSG00000285407.1; AL033530.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.3265 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC7-20:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CTH-20:2
5.1 lnc-CTH-20:2
5.2 lnc-LRRC7-20:2