Transcript: lnc-LRRC61-2:3

Basic information

LNCipedia transcript ID: lnc-LRRC61-2:3 
LNCipedia gene ID: lnc-LRRC61-2
Location (hg38): chr7:150343627-150357917
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013628; NONHSAT124109
Alternative gene names: XLOC_006291; linc-REPIN1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.4794 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC61-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRC61-1:3
3.1 lnc-LRRC61-2:3
4.0 lnc-LRRC61-2:3
4.1 lnc-LRRC61-2:3
5.0 lnc-LRRC61-2:3
5.1 lnc-GIMAP2-17:4
5.2 lnc-LRRC61-2:3