Transcript: lnc-LRRC57-2:1

Basic information

LNCipedia transcript ID: lnc-LRRC57-2:1 
LNCipedia gene ID: lnc-LRRC57-2
Ensembl Gene ID: ENSG00000261822
Ensembl Transcript ID: ENST00000561902
Location (hg38): chr15:42567031-42569994
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 542 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561902.1; RP11-265N6.2-001; OTTHUMT00000429970.1; NONHSAT042020
Alternative gene names: ENSG00000261822.1; RP11-265N6.2; OTTHUMG00000175436.1; AC018362.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.1689 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC57-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC57-2:1
4.0 lnc-LRRC57-2:1
4.1 lnc-LRRC57-2:1
5.0 lnc-LRRC57-2:1
5.1 lnc-TTBK2-2:1
5.2 lnc-LRRC57-2:1