Transcript: lnc-LRRC47-78:11

Basic information

LNCipedia transcript ID: lnc-LRRC47-78:11 
LNCipedia gene ID: lnc-LRRC47-78
RefSeq ID: NR_033711
Location (hg38): chr1:3735984-3747373
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6409 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT000533; NR_033711; NR_033711.1
Alternative gene names: PDAM; TP73-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 171.3941 coding 
CPAT coding probability 83.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRRC47-78:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC47-1:6
4.0 TP73-AS1:4
4.1 TP73-AS1:4
5.0 TP73-AS1:4
5.1 lnc-CLSTN1-78:11
5.2 lnc-LRRC47-78:11