Transcript: lnc-LRRC10-1:2

Basic information

LNCipedia transcript ID: lnc-LRRC10-1:2 
LNCipedia gene ID: lnc-LRRC10-1
Location (hg38): chr12:69353169-69353656
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 429 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000548626.1; RP11-1143G9.4-002; OTTHUMT00000403661.1; NONHSAT029360
Alternative gene names: ENSG00000257764.1; RP11-1143G9.4; OTTHUMG00000169357.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC10-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC10-1:2
4.0 lnc-LRRC10-1:2
4.1 lnc-LRRC10-1:2
5.0 lnc-LRRC10-1:2
5.1 lnc-LRRC10-6:2
5.2 lnc-LRRC10-1:2