Transcript: lnc-LRRC1-6:2

Basic information

LNCipedia transcript ID: lnc-LRRC1-6:2 
LNCipedia gene ID: lnc-LRRC1-6
Location (hg38): chr6:53736546-53739229
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3193_chr6:53601343-53603926_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.4222 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC1-6:2
4.0 lnc-LRRC1-6:2
4.1 lnc-LRRC1-6:2
5.0 lnc-LRRC1-6:2
5.1 lnc-EFHC1-25:2
5.2 lnc-LRRC1-6:2