Transcript: lnc-LRCOL1-2:13

Basic information

LNCipedia transcript ID: lnc-LRCOL1-2:13 
LNCipedia gene ID: lnc-LRCOL1-2
Location (hg38): chr12:132604339-132610397
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 485 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000544018; NONHSAT032108
Alternative gene names: ENSG00000204583; RP13-554M15.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -367.6037 non-coding 
CPAT coding probability 78.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRCOL1-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLE-1:2
3.1 lnc-POLE-2:2
4.0 lnc-POLE-2:2
4.1 lnc-POLE-2:2
5.0 lnc-POLE-2:2
5.1 lnc-LRCOL1-2:2
5.2 lnc-LRCOL1-2:13