Transcript: lnc-LRCH2-2:1

Basic information

LNCipedia transcript ID: lnc-LRCH2-2:1 
LNCipedia gene ID: lnc-LRCH2-2
Location (hg38): chrX:115424282-115468598
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1757 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004eqc_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.4477 non-coding 
CPAT coding probability 23.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRCH2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRCH2-2:1
4.0 lnc-LRCH2-2:1
4.1 lnc-LRCH2-2:1
5.0 lnc-LRCH2-2:1
5.1 lnc-CT47A8-74:1
5.2 lnc-LRCH2-2:1