Transcript: lnc-LPCAT1-4:29

Basic information

LNCipedia transcript ID: lnc-LPCAT1-4:29 
LNCipedia gene ID: lnc-LPCAT1-4
Location (hg38): chr5:1568522-1579580
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1026 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT100031
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 191.822 coding 
CPAT coding probability 89.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LPCAT1-4:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LPCAT1-3:25
4.0 lnc-LPCAT1-3:25
4.1 lnc-LPCAT1-3:25
5.0 lnc-LPCAT1-3:25
5.1 lnc-IRX2-13:29
5.2 lnc-LPCAT1-4:29