Transcript: lnc-LMTK3-4:2

Basic information

LNCipedia transcript ID: lnc-LMTK3-4:2 
LNCipedia gene ID: lnc-LMTK3-4
Ensembl Gene ID: ENSG00000268530
Ensembl Transcript ID: ENST00000600650
Location (hg38): chr19:48465663-48469507
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1006 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067072; ENST00000600650.1
Alternative gene names: ENSG00000268530.1; CTC-273B12.5; ENSG00000268530.5; AC008403.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -539.4549 non-coding 
CPAT coding probability 13.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMTK3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LMTK3-4:2
4.0 lnc-LMTK3-4:2
4.1 lnc-LMTK3-4:2
5.0 lnc-LMTK3-4:2
5.1 lnc-TMEM143-4:8
5.2 lnc-LMTK3-4:2