Transcript: lnc-LMBR1-12:3

Basic information

LNCipedia transcript ID: lnc-LMBR1-12:3 
LNCipedia gene ID: lnc-LMBR1-12
Ensembl Gene ID: ENSG00000233878
Ensembl Transcript ID: ENST00000436670
RefSeq ID: NR_038232
Location (hg38): chr7:156437789-156445588
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2698 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000436670; ENST00000436670.1; AC073133.1-001; OTTHUMT00000322673.1; NONHSAT124414; NR_038232; NR_038232.1
Alternative gene names: ENSG00000233878; AC073133.1; ENSG00000233878.1; OTTHUMG00000151444.1; AC073133.2; LOC285889


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.5552 non-coding 
CPAT coding probability 32.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMBR1-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf13-2:1
3.1 lnc-C7orf13-2:1
4.0 lnc-C7orf13-12:1
4.1 lnc-C7orf13-12:1
5.0 lnc-C7orf13-12:1
5.1 lnc-LMBR1-12:1
5.2 lnc-LMBR1-12:3