Transcript: lnc-LIPG-13:1

Basic information

LNCipedia transcript ID: lnc-LIPG-13:1 
LNCipedia gene ID: lnc-LIPG-13
Location (hg38): chr18:49813915-49818783
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4869 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT059251
Alternative gene names: SCARNA17HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3186 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIPG-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIPG-3:2
4.0 SNHG22:1
4.1 SNHG22:1
5.0 SNHG22:1
5.1 lnc-CTIF-111:1
5.2 lnc-LIPG-13:1