Transcript: lnc-LINC02203-1:3

Basic information

LNCipedia transcript ID: lnc-LINC02203-1:3 
LNCipedia gene ID: lnc-LINC02203-1
Location (hg38): chr15:21552812-21557153
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 527 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000564932.1; RP11-928F19.5-001; OTTHUMT00000431558.1
Alternative gene names: ENSG00000261841.1; RP11-928F19.5; OTTHUMG00000176137.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.1504 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINC02203-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4M2-1:2
4.0 lnc-OR4M2-1:2
4.1 lnc-OR4M2-1:2
5.0 lnc-OR4M2-1:2
5.1 lnc-SNRPN-59:4
5.2 lnc-LINC02203-1:3