Transcript: lnc-LIMS3-1:16

Basic information

LNCipedia transcript ID: lnc-LIMS3-1:16 
LNCipedia gene ID: lnc-LIMS3-1
Location (hg38): chr2:109947364-109968570
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1098 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT073159
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.7436 non-coding 
CPAT coding probability 7.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LIMS3-1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIMS3.1-1:12
4.0 lnc-LIMS3-1:16
4.1 lnc-LIMS3-1:16
5.0 lnc-LIMS3-1:16
5.1 lnc-SULT1C4-22:11
5.2 lnc-LIMS3-1:16