Transcript: lnc-LGR6-8:1

Basic information

LNCipedia transcript ID: lnc-LGR6-8:1 
LNCipedia gene ID: lnc-LGR6-8
Location (hg38): chr1:202130031-202131425
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1395 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000565762.1; RP11-294K24.4-001; OTTHUMT00000431751.1; NONHSAT008796
Alternative gene names: ENSG00000260800.1; RP11-294K24.4; OTTHUMG00000176314.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1589 non-coding 
CPAT coding probability 10.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGR6-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR37L1-1:1
4.0 lnc-GPR37L1-1:1
4.1 lnc-GPR37L1-1:1
5.0 lnc-GPR37L1-1:1
5.1 lnc-ADORA1-41:1
5.2 lnc-LGR6-8:1