Transcript: lnc-LGALS14-1:4

Basic information

LNCipedia transcript ID: lnc-LGALS14-1:4 
LNCipedia gene ID: lnc-LGALS14-1
Ensembl Gene ID: ENSG00000269460
Ensembl Transcript ID: ENST00000456368
Location (hg38): chr19:39685244-39694577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 289 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456368; ENST00000456368.1; AC093063.1-003; OTTHUMT00000280516.1; NONHSAT146987
Alternative gene names: ENSG00000226025; AC093063.1; ENSG00000226025.3; OTTHUMG00000141285.1; ENSG00000269460.1; AC093063.3; AC005515.1; AC005515.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.4432 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALS14-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LGALS14-1:4
3.1 lnc-LGALS14-1:4
4.0 lnc-LGALS14-1:4
4.1 lnc-LGALS14-1:4
5.0 lnc-LGALS14-1:4
5.1 lnc-IFNL1-21:4
5.2 lnc-LGALS14-1:4