Transcript: lnc-LGALS14-1:3

Basic information

LNCipedia transcript ID: lnc-LGALS14-1:3 
LNCipedia gene ID: lnc-LGALS14-1
Location (hg38): chr19:39679393-39685251
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1807 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000458539; ENST00000458539.1; AC093063.1-002; OTTHUMT00000280515.1; NONHSAT066320
Alternative gene names: ENSG00000226025; AC093063.1; ENSG00000226025.3; OTTHUMG00000141285.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.5374 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALS14-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LGALS14-1:3
3.1 lnc-LGALS14-1:3
4.0 lnc-LGALS14-1:3
4.1 lnc-LGALS14-1:3
5.0 lnc-LGALS14-1:3
5.1 lnc-IFNL1-21:3
5.2 lnc-LGALS14-1:3