Transcript: lnc-LGALS14-1:1

Basic information

LNCipedia transcript ID: lnc-LGALS14-1:1 
LNCipedia gene ID: lnc-LGALS14-1
Location (hg38): chr19:39679374-39685721
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2584 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000455832; ENST00000455832.3; AC093063.1-201
Alternative gene names: ENSG00000226025; AC093063.1; ENSG00000226025.3; OTTHUMG00000141285.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.5374 non-coding 
CPAT coding probability 64.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LGALS14-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LGALS14-1:1
3.1 lnc-LGALS14-1:1
4.0 lnc-LGALS14-1:1
4.1 lnc-LGALS14-1:1
5.0 lnc-LGALS14-1:1
5.1 lnc-IFNL1-21:1
5.2 lnc-LGALS14-1:1