Transcript: lnc-LEF1-4:4

Basic information

LNCipedia transcript ID: lnc-LEF1-4:4 
LNCipedia gene ID: lnc-LEF1-4
Location (hg38): chr4:108303263-108355712
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6644 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073376.1|MICT00000269290.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.5422 non-coding 
CPAT coding probability 3.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEF1-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LEF1-4:4
5.0 lnc-LEF1-4:4
5.1 lnc-TIFA-31:1
5.2 lnc-LEF1-4:4