Transcript: lnc-LEF1-1:11

Basic information

LNCipedia transcript ID: lnc-LEF1-1:11 
LNCipedia gene ID: lnc-LEF1-1
Location (hg38): chr4:108048527-108070895
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 548 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT097739
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 369.1224 coding 
CPAT coding probability 23.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LEF1-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPSS1-1:10
4.0 lnc-LEF1-1:11
4.1 lnc-LEF1-1:11
5.0 lnc-LEF1-1:11
5.1 lnc-TIFA-32:11
5.2 lnc-LEF1-1:11