Transcript: lnc-LCTL-2:3

Basic information

LNCipedia transcript ID: lnc-LCTL-2:3 
LNCipedia gene ID: lnc-LCTL-2
Location (hg38): chr15:66838856-66842241
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 772 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025320.1|ENCT00000150376.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.7081 non-coding 
CPAT coding probability 3.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LCTL-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LCTL-2:3
5.0 lnc-LCTL-2:3
5.1 lnc-AAGAB-2:14
5.2 lnc-LCTL-2:3