Transcript: lnc-LARP1B-1:31

Basic information

LNCipedia transcript ID: lnc-LARP1B-1:31 
LNCipedia gene ID: lnc-LARP1B-1
RefSeq ID: NR_125882
Location (hg38): chr4:128428016-128519398
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2070 bp
Exons: 9
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125882.1
Alternative gene names: LOC100507487


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -130.0028 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARP1B-1:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ABHD18-5:21
5.1 lnc-ABHD18-5:21
5.2 lnc-LARP1B-1:31