Transcript: lnc-LARGE1-4:1

Basic information

LNCipedia transcript ID: lnc-LARGE1-4:1 
LNCipedia gene ID: lnc-LARGE1-4
Location (hg38): chr22:34349830-34360229
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 416 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029688; NONHSAT085032
Alternative gene names: XLOC_014356; linc-LARGE-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.043 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARGE1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LARGE-3:1
3.1 lnc-LARGE-3:1
4.0 lnc-LARGE-3:1
4.1 lnc-LARGE-3:1
5.0 lnc-LARGE-3:1
5.1 lnc-SYN3-19:1
5.2 lnc-LARGE1-4:1