Transcript: lnc-LARGE1-1:1

Basic information

LNCipedia transcript ID: lnc-LARGE1-1:1 
LNCipedia gene ID: lnc-LARGE1-1
Location (hg38): chr22:34190962-34210558
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4812 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224404.1|MICT00000232691.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.8254 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARGE1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LARGE-1:4
5.0 lnc-LARGE-1:4
5.1 lnc-SYN3-17:1
5.2 lnc-LARGE1-1:1