Transcript: lnc-KRTCAP3-2:1

Basic information

LNCipedia transcript ID: lnc-KRTCAP3-2:1 
LNCipedia gene ID: lnc-KRTCAP3-2
Location (hg38): chr2:27455156-27455862
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 397 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT069778
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3589 non-coding 
CPAT coding probability 26.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRTCAP3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRTCAP3-2:1
4.0 lnc-KRTCAP3-2:1
4.1 lnc-KRTCAP3-2:1
5.0 lnc-KRTCAP3-2:1
5.1 lnc-SNX17-6:1
5.2 lnc-KRTCAP3-2:1