Transcript: lnc-KRTCAP2-1:4

Basic information

LNCipedia transcript ID: lnc-KRTCAP2-1:4 
LNCipedia gene ID: lnc-KRTCAP2-1
Location (hg38): chr1:155169408-155173254
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 477 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT006690
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 736.9713 coding 
CPAT coding probability 88.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRTCAP2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRTCAP2-1:4
4.0 lnc-KRTCAP2-1:4
4.1 lnc-KRTCAP2-1:4
5.0 lnc-KRTCAP2-1:4
5.1 lnc-MUC1-4:4
5.2 lnc-KRTCAP2-1:4