Transcript: lnc-KRTAP9-7-5:5

Basic information

LNCipedia transcript ID: lnc-KRTAP9-7-5:5 
LNCipedia gene ID: lnc-KRTAP9-7-5
Location (hg38): chr17:41108265-41287370
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 5303 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000031368.1|ENCT00000174886.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.381 non-coding 
CPAT coding probability 9.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRTAP9-7-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRTAP9-7-5:5
5.0 lnc-KRTAP9-7-5:5
5.1 lnc-THRA-47:5
5.2 lnc-KRTAP9-7-5:5