Transcript: lnc-KRT80-2:3

Basic information

LNCipedia transcript ID: lnc-KRT80-2:3 
LNCipedia gene ID: lnc-KRT80-2
Location (hg38): chr12:52089140-52118218
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7299 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257989.1|MICT00000078812.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.1671 non-coding 
CPAT coding probability 94.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRT80-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRT80-2:3
5.0 lnc-KRT80-2:3
5.1 lnc-FIGNL2-2:1
5.2 lnc-KRT80-2:3