Transcript: lnc-KRT8-1:1

Basic information

LNCipedia transcript ID: lnc-KRT8-1:1 
LNCipedia gene ID: lnc-KRT8-1
Location (hg38): chr12:52949216-52949954
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 542 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT028386
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score 110.5255 coding 
CPAT coding probability 66.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRT8-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRT78-1:1
4.0 lnc-KRT8-1:1
4.1 lnc-KRT8-1:1
5.0 lnc-KRT8-1:1
5.1 lnc-KRT79-5:1
5.2 lnc-KRT8-1:1