Transcript: lnc-KRT17-2:1

Basic information

LNCipedia transcript ID: lnc-KRT17-2:1 
LNCipedia gene ID: lnc-KRT17-2
Location (hg38): chr17:41630554-41635674
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT053642
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -268.2449 non-coding 
CPAT coding probability 7.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRT17-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRT17-1:2
4.0 lnc-KRT17-2:1
4.1 lnc-KRT17-2:1
5.0 lnc-KRT17-2:1
5.1 lnc-BRCA1-54:1
5.2 lnc-KRT17-2:1