Transcript: lnc-KMO-1:2

Basic information

LNCipedia transcript ID: lnc-KMO-1:2 
LNCipedia gene ID: lnc-KMO-1
Ensembl Gene ID: ENSG00000225554
Ensembl Transcript ID: ENST00000413994
Location (hg38): chr1:241424398-241433492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413994; ENST00000413994.1; RP11-527D7.1-002; OTTHUMT00000095492.1
Alternative gene names: ENSG00000225554; RP11-527D7.1; ENSG00000225554.1; OTTHUMG00000039598.1; AL359764.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.7768 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KMO-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KMO-1:2
3.1 lnc-KMO-1:2
4.0 lnc-KMO-1:2
4.1 lnc-KMO-1:2
5.0 lnc-KMO-1:2
5.1 lnc-KMO-1:2
5.2 lnc-KMO-1:2