Transcript: lnc-KLHL32-4:24

Basic information

LNCipedia transcript ID: lnc-KLHL32-4:24 
LNCipedia gene ID: lnc-KLHL32-4
Location (hg38): chr6:98275146-98279859
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 226 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000439279; ENST00000439279.1; RP11-436D23.1-001; OTTHUMT00000041583.1; NONHSAT114102
Alternative gene names: ENSG00000225994; RP11-436D23.1; ENSG00000225994.1; OTTHUMG00000015255.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -570.5193 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL32-4:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POU3F2-1:1
3.1 lnc-POU3F2-2:1
4.0 lnc-KLHL32-4:24
4.1 lnc-KLHL32-4:24
5.0 lnc-KLHL32-4:24
5.1 lnc-PM20D2-65:49
5.2 lnc-KLHL32-4:24