Transcript: lnc-KLHL32-4:19

Basic information

LNCipedia transcript ID: lnc-KLHL32-4:19 
LNCipedia gene ID: lnc-KLHL32-4
Ensembl Gene ID: ENSG00000271860
Ensembl Transcript ID: ENST00000433637
Location (hg38): chr6:97305637-97708850
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1984 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT114086; ENST00000433637.2
Alternative gene names: ENSG00000271860.6; RP11-436D23.1; AL589740.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.0534 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL32-4:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL32-3:5
4.0 lnc-KLHL32-4:19
4.1 lnc-KLHL32-4:19
5.0 lnc-KLHL32-4:19
5.1 lnc-PM20D2-65:14
5.2 lnc-KLHL32-4:19