Transcript: lnc-KIAA1549L-1:2

Basic information

LNCipedia transcript ID: lnc-KIAA1549L-1:2 
LNCipedia gene ID: lnc-KIAA1549L-1
Location (hg38): chr11:33709435-33710022
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 568 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000524444.1; RP4-541C22.4-001; OTTHUMT00000388819.1; NONHSAT018711
Alternative gene names: ENSG00000254549.1; RP4-541C22.4; OTTHUMG00000166271.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.3837 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA1549L-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf41-1:1
4.0 lnc-C11orf41-1:1
4.1 lnc-C11orf41-1:1
5.0 lnc-C11orf41-1:1
5.1 lnc-KIAA1549L-1:1
5.2 lnc-KIAA1549L-1:2