Transcript: lnc-KIAA1211L-1:6

Basic information

LNCipedia transcript ID: lnc-KIAA1211L-1:6 
LNCipedia gene ID: lnc-KIAA1211L-1
Location (hg38): chr2:98767786-98772089
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1529 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004347; NONHSAT072724
Alternative gene names: XLOC_002221; linc-MGAT4A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.2387 non-coding 
CPAT coding probability 7.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA1211L-1:6 no no no no

Available literature

  1. Durinck (2014), The Notch driven long non-coding RNA repertoire in T-cell acute lymphoblastic leukemia., Haematologica


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C2orf55-1:3
3.1 lnc-C2orf55-1:3
4.0 lnc-C2orf55-1:3
4.1 lnc-C2orf55-1:3
5.0 lnc-C2orf55-1:3
5.1 lnc-AFF3-18:6
5.2 lnc-KIAA1211L-1:6